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Logo cbMDS Correlation Based Multi Dimensional Scaling 1.2

by emstrick - July 27, 2013, 14:35:36 CET [ BibTeX BibTeX for corresponding Paper Download ] 22366 views, 4958 downloads, 0 subscriptions

About: The aim is to embed a given data relationship matrix into a low-dimensional Euclidean space such that the point distances / distance ranks correlate best with the original input relationships. Input relationships may be given as (sparse) (asymmetric) distance, dissimilarity, or (negative!) score matrices. Input-output relations are modeled as low-conditioned. (Weighted) Pearson and soft Spearman rank correlation, and unweighted soft Kendall correlation are supported correlation measures for input/output object neighborhood relationships.

Changes:
  • Initial release (Ver 1.0): Weighted Pearson and correlation and soft Spearman rank correlation, Tue Dec 4 16:14:51 CET 2012

  • Ver 1.1 Added soft Kendall correlation, Fri Mar 8 08:41:09 CET 2013

  • Ver 1.2 Added reconstruction of sparse relationship matrices, Fri Jul 26 16:58:37 CEST 2013


Logo Sparse PCA 2.0

by tbuehler - December 31, 2015, 16:24:42 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22296 views, 4354 downloads, 0 subscriptions

About: A Matlab implementation of Sparse PCA using the inverse power method for nonlinear eigenproblems.

Changes:
  • Added deflation scheme to compute multiple principal components
  • Several internal runtime and memory optimizations
  • API change: sparsePCA.m is now used to compute multiple components; use computeTradeOffCurve.m to reproduce the examples in the NIPS paper

Logo r-cran-bartMachine 1.2.4.2

by r-cran-robot - May 4, 2018, 00:00:00 CET [ Project Homepage BibTeX Download ] 22221 views, 6059 downloads, 0 subscriptions

About: Bayesian Additive Regression Trees

Changes:

Fetched by r-cran-robot on 2018-09-01 00:00:04.021726


Logo MOSIS 0.55

by claasahl - March 9, 2014, 17:35:40 CET [ BibTeX Download ] 22208 views, 7074 downloads, 0 subscriptions

About: MOSIS is a modularized framework for signal processing, stream analysis, machine learning and stream mining applications.

Changes:
  • Move "flow"-related classes into package "de.claas.mosis.flow" (e.g. Node and Link).
  • Refined and improved "flow"-related tests (e.g. Iterator and Node tests).
  • Refactored tests for data formats (e.g. PlainText and JSON tests).
  • Added visitor design pattern for graph-based functions (e.g. initialization and processing).
  • Documented parameters of Processor implementations.

Logo SVM with uncertain labels 0.2

by rflamary - July 17, 2012, 11:06:23 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22206 views, 4571 downloads, 0 subscriptions

About: Matlab code for learning probabilistic SVM in the presence of uncertain labels.

Changes:

Added missing dataset function (thanks to Hao Wu)


Logo PILCO policy search framework 0.9

by marc - September 27, 2013, 12:45:12 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22197 views, 3608 downloads, 0 subscriptions

About: Data-efficient policy search framework using probabilistic Gaussian process models

Changes:

Initial Announcement on mloss.org.


Logo SMIDAS 1.1

by ambujtewari - August 15, 2010, 18:51:51 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22185 views, 4387 downloads, 0 subscriptions

About: A stochastic variant of the mirror descent algorithm employing Langford and Zhang's truncated gradient idea to minimize L1 regularized loss minimization problems for classification and regression.

Changes:

Fixed major bug in implementation. The components of the iterate where the current example vector is zero were not being updated correctly. Thanks to Jonathan Chang for pointing out the error to us.


Logo Debellor 1.0

by mwojnars - July 30, 2009, 16:48:05 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22133 views, 5218 downloads, 0 subscriptions

About: Debellor is a scalable and extensible platform which provides common architecture for data mining and machine learning algorithms of various types.

Changes:
  • Naming of numerous classes/methods/fields changed to be more accurate and comprehensible
  • Weka and Rseslib libraries updated to the newest versions: Weka 3.6.1 & Rseslib 3.0.1. Debellor's wrappers adapted
  • New class: CrossValidation - evaluator of trainable cells through cross-validation
  • New class: RMSE - calculation of Root Mean Squared Error score
  • Data objects can be compared and used in collections
  • ArffReader can read from a user-provided java.io.InputStream
  • More convenient use of parameters (setting values)
  • More convenient use of data objects and data types (construction, type casting)
  • Other minor improvements to existing classes
  • Javadoc extended

Logo Graph Learning Package 0.1

by hiroto - May 4, 2009, 17:07:15 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22130 views, 4190 downloads, 0 subscriptions

About: This software is aimed at performing supervised/unsupervised learning on graph data, where each graph is represented as binary indicators of subgraph features.

Changes:

Initial Announcement on mloss.org.


Logo pGBRT, Parallel Gradient Boosted Regression Trees 0.9

by swtyree - September 16, 2011, 22:15:46 CET [ Project Homepage BibTeX Download ] 21932 views, 3492 downloads, 0 subscriptions

About: Learns gradient boosted regression tree ensembles in parallel on shared memory or cluster systems

Changes:

Initial Announcement on mloss.org.


Logo seqan 1.2

by sonne - November 2, 2009, 14:54:08 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 21671 views, 4063 downloads, 0 subscriptions

About: SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data.

Changes:
  • 5 more applications, i.e. DFI, MicroRazerS, PairAlign, SeqCons, TreeRecon
  • stable release of RazerS supporting paired-end read mapping and configurable sensitivity
  • new alignment algorithms, e.g. banded, configurable alignments (overlap, semi-global, ...)
  • realignment algorithm
  • NGS data structures and formats, e.g. SAM, Amos, ...
  • new alphabets, e.g. Dna with base call qualities, profile characters
  • auxiliary data structures and algorithms, e.g. double ended queue, command line parser
  • positional scores
  • CMake support

Logo Multilinear Principal Component Analysis 1.3

by hplu - September 8, 2013, 13:04:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 21613 views, 3983 downloads, 0 subscriptions

About: A Matlab implementation of Multilinear PCA (MPCA) and MPCA+LDA for dimensionality reduction of tensor data with sample code on gait recognition

Changes:
  1. The MPCA paper is updated with a typo (the MAD measure in Table II) corrected.

  2. Tensor toolbox version 2.1 is included for convenience.

  3. Full code on gait recognition is included for verification and comparison.


Logo K tree 0.4.2

by cdevries - July 4, 2011, 06:01:59 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 21506 views, 4652 downloads, 0 subscriptions

About: The K-tree is a scalable approach to clustering inspired by the B+-tree and k-means algorithms.

Changes:

Release of K-tree implementation in Python. This is targeted at a research and rapid prototyping audience.


Logo HDDM 0.5

by Wiecki - April 24, 2013, 02:53:07 CET [ Project Homepage BibTeX Download ] 21442 views, 5254 downloads, 0 subscriptions

About: HDDM is a python toolbox for hierarchical Bayesian parameter estimation of the Drift Diffusion Model (via PyMC). Drift Diffusion Models are used widely in psychology and cognitive neuroscience to study decision making.

Changes:
  • New and improved HDDM model with the following changes:
    • Priors: by default model will use informative priors (see http://ski.clps.brown.edu/hddm_docs/methods.html#hierarchical-drift-diffusion-models-used-in-hddm) If you want uninformative priors, set informative=False.
    • Sampling: This model uses slice sampling which leads to faster convergence while being slower to generate an individual sample. In our experiments, burnin of 20 is often good enough.
    • Inter-trial variablity parameters are only estimated at the group level, not for individual subjects.
    • The old model has been renamed to HDDMTransformed.
    • HDDMRegression and HDDMStimCoding are also using this model.
  • HDDMRegression takes patsy model specification strings. See http://ski.clps.brown.edu/hddm_docs/howto.html#estimate-a-regression-model and http://ski.clps.brown.edu/hddm_docs/tutorial_regression_stimcoding.html#chap-tutorial-hddm-regression
  • Improved online documentation at http://ski.clps.brown.edu/hddm_docs
  • A new HDDM demo at http://ski.clps.brown.edu/hddm_docs/demo.html
  • Ratcliff's quantile optimization method for single subjects and groups using the .optimize() method
  • Maximum likelihood optimization.
  • Many bugfixes and better test coverage.
  • hddm_fit.py command line utility is depracated.

Logo pySPACE 1.2

by krell84 - October 29, 2014, 15:36:28 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 21421 views, 4240 downloads, 0 subscriptions

About: pySPACE is the abbreviation for "Signal Processing and Classification Environment in Python using YAML and supporting parallelization". It is a modular software for processing of large data streams that has been specifically designed to enable distributed execution and empirical evaluation of signal processing chains. Various signal processing algorithms (so called nodes) are available within the software, from finite impulse response filters over data-dependent spatial filters (e.g. CSP, xDAWN) to established classifiers (e.g. SVM, LDA). pySPACE incorporates the concept of node and node chains of the MDP framework. Due to its modular architecture, the software can easily be extended with new processing nodes and more general operations. Large scale empirical investigations can be configured using simple text- configuration files in the YAML format, executed on different (distributed) computing modalities, and evaluated using an interactive graphical user interface.

Changes:

improved testing, improved documentation, windows compatibility, more algorithms


Logo Rchemcpp 1.99.0

by klambaue - September 10, 2013, 09:10:13 CET [ Project Homepage BibTeX Download ] 21386 views, 4832 downloads, 0 subscriptions

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About: The Rchemcpp package implements the marginalized graph kernel and extensions, Tanimoto kernels, graph kernels, pharmacophore and 3D kernels suggested for measuring the similarity of molecules.

Changes:

Moved from CRAN to Bioconductor. Improved handling of molecules, visualization and examples.


Logo GraphLab v1-1908

by dannybickson - November 22, 2011, 12:50:00 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 21342 views, 4110 downloads, 0 subscriptions

About: Multicore/distributed large scale machine learning framework.

Changes:

Update version.


Logo multi assignment clustering of Boolean data 2.001

by mafrank - March 3, 2012, 09:04:04 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 21289 views, 3537 downloads, 0 subscriptions

About: Implementation of the multi-assignment clustering method for Boolean vectors.

Changes:

new bib added


Logo scikit multilearn 0.0.5

by niedakh - February 25, 2017, 03:51:59 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 21284 views, 4628 downloads, 0 subscriptions

About: A native Python, scikit-compatible, implementation of a variety of multi-label classification algorithms.

Changes:
  • a general matrix-based label space clusterer has been added which can cluster the output space using any scikit-learn compatible clusterer (incl. k-means)
  • support for more single-class and multi-class classifiers you can now use problem transformation approaches with your favourite neural networks/deep learning libraries: theano, tensorflow, keras, scikit-neuralnetworks
  • support for label powerset based stratified kfold added
  • graph-tool clusterer supports weighted graphs again and includes stochastic blockmodel calibration
  • bugs were fixed in: classifier chains and hierarchical neuro fuzzy clasifiers

Logo SimpleMKL 0.5

by arakotom - June 11, 2008, 00:56:47 CET [ Project Homepage BibTeX Download ] 21276 views, 5648 downloads, 1 subscription

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About: Matlab Multiple Kernel Learning toolbox. Features : MKL for SVM Classification, Regression and MultiClass. It needs SVM-KM Toolbox

Changes:

Initial Announcement on mloss.org.


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