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About: This toolbox implements models for Bayesian mixedeffects inference on classification performance in hierarchical classification analyses. Changes:In addition to the existing MATLAB implementation, the toolbox now also contains an R package of the variational Bayesian algorithm for mixedeffects inference.

About: Multicore/distributed large scale machine learning framework. Changes:Update version.

About: Least Angle Regression, Lasso and Forward Stagewise Changes:Fetched by rcranrobot on 20130401 00:00:05.906244

About: The aim is to embed a given data relationship matrix into a lowdimensional Euclidean space such that the point distances / distance ranks correlate best with the original input relationships. Input relationships may be given as (sparse) (asymmetric) distance, dissimilarity, or (negative!) score matrices. Inputoutput relations are modeled as lowconditioned. (Weighted) Pearson and soft Spearman rank correlation, and unweighted soft Kendall correlation are supported correlation measures for input/output object neighborhood relationships. Changes:

About: TinyOS is a small operating for small (wireless) sensors. LEGO MINDSTORMS NXT is a platform for embedded systems experimentation: The combination of NXT and TinyOS is NXTMOTE. Changes:Initial Announcement on mloss.org.

About: Boosting algorithms for classification and regression, with many variations. Features include: Scalable and robust; Easily customizable loss functions; Oneshot training for an entire regularization path; Continuous checkpointing; much more Changes:

About: MOSIS is a modularized framework for signal processing, stream analysis, machine learning and stream mining applications. Changes:

About: Toeblitz is a MATLAB/Octave package for operations on positive definite Toeplitz matrices. It can solve Toeplitz systems Tx = b in O(n*log(n)) time and O(n) memory, compute matrix inverses T^(1) (with free log determinant) in O(n^2) time and memory, compute log determinants (without inverses) in O(n^2) time and O(n) memory, and compute traces of products A*T for any matrix A, in minimal O(n^2) time and memory. Changes:Adding a writeup in written/toeblitz.pdf describing the package.

About: Implementation of LSTM for biological sequence analysis (classification, regression, motif discovery, remote homology detection). Additionally a LSTM as logistic regression with spectrum kernel is included. Changes:Spectrum LSTM package included

About: An extensible C++ library of Hierarchical Bayesian clustering algorithms, such as Bayesian Gaussian mixture models, variational Dirichlet processes, Gaussian latent Dirichlet allocation and more. Changes:New maximum cluster argument for all algorithms. Also no more matlab interface since it seemed no one was using it, and I cannot support it any longer.

About: HDDM is a python toolbox for hierarchical Bayesian parameter estimation of the Drift Diffusion Model (via PyMC). Drift Diffusion Models are used widely in psychology and cognitive neuroscience to study decision making. Changes:

About: We provide some preliminary code for multiclass multiple kernel learning in Matlab using CPLEX as a base solver. Changes:Initial Announcement on mloss.org.

About: Message passing for topic modeling Changes:

About: BSVM solves support vector machines (SVM) for the solution of large classification and regression problems. It includes three methods Changes:Initial Announcement on mloss.org.

About: pySPACE is the abbreviation for "Signal Processing and Classification Environment in Python using YAML and supporting parallelization". It is a modular software for processing of large data streams that has been specifically designed to enable distributed execution and empirical evaluation of signal processing chains. Various signal processing algorithms (so called nodes) are available within the software, from finite impulse response filters over datadependent spatial filters (e.g. CSP, xDAWN) to established classifiers (e.g. SVM, LDA). pySPACE incorporates the concept of node and node chains of the MDP framework. Due to its modular architecture, the software can easily be extended with new processing nodes and more general operations. Large scale empirical investigations can be configured using simple text configuration files in the YAML format, executed on different (distributed) computing modalities, and evaluated using an interactive graphical user interface. Changes:improved testing, improved documentation, windows compatibility, more algorithms

About: hapFabia is an R package for identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data. It detects 100 times smaller segments than previous methods. Changes:o citation update o plot function improved

About: The Rchemcpp package implements the marginalized graph kernel and extensions, Tanimoto kernels, graph kernels, pharmacophore and 3D kernels suggested for measuring the similarity of molecules. Changes:Moved from CRAN to Bioconductor. Improved handling of molecules, visualization and examples.

About: The HighDimensional Data Clustering (HDDC) toolbox contains an efficient unsupervised classifier for highdimensional data. This classifier is based on a mixture of Gaussian models adapted for [...] Changes:Initial Announcement on mloss.org.

About: Disco is an opensource implementation of the [MapReduce framework](http://en.wikipedia.org/wiki/MapReduce) for distributed computing. As the original framework, Disco supports parallel [...] Changes:Initial Announcement on mloss.org.

About: This code is provided by Jun Wan. It is used in the Chalearn oneshot learning gesture challenge (round 2). This code includes: bag of features, 3D MoSIFTbased features (i.e. 3D MoSIFT, 3D EMoSIFT and 3D SMoSIFT), and the MFSK feature. Changes:Initial Announcement on mloss.org.
