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LSTM for biological sequence analysis 1.0

by mhex - July 28, 2010, 16:32:29 CET [ ] 16346 views, 3700 downloads, 0 subscriptions

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About: Implementation of LSTM for biological sequence analysis (classification, regression, motif discovery, remote homology detection). Additionally a LSTM as logistic regression with spectrum kernel is included.

Changes:

Spectrum LSTM package included

Authors: Martin Heusel, Sepp Hochreiter
License: Gnu Gpl V2
Programming Language: Java

Operating System: Platform Independent
Data Formats: Fasta
Tags: Bioinformatics, Sequence Analysis, Classification, Regression, Parallel, Recurrent Neural Networks, Motif Discovery, Genetic, Proteins, Remote Homology Detection, Multi Core, Multi Threaded

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LSTM for biological sequence analysis 1.0