Projects that are tagged with alignment.


Logo Local Alignment Kernels 0.3.2

by hiroto - December 1, 2007, 00:10:23 CET [ Project Homepage BibTeX Download ] 9006 views, 2230 downloads, 0 subscriptions

About: Local alignment kernels measure the similarity between two sequences by summing up scores obtained from local alignments with gaps of the sequences.

Changes:

Initial Announcement on mloss.org.


Logo PALMA: mRNA to Genome Alignments using Large Margin Algorithms 0.3.7

by gxr - November 26, 2007, 21:14:57 CET [ Project Homepage BibTeX Download ] 7616 views, 2121 downloads, 0 subscriptions

About: PALMA computes the optimal spliced alignment of a mRNA sequence to a genomic sequence. The main python script takes two FASTA files containing the target (e.g. a DNA sequence, part of the genome) [...]

Changes:

Initial Announcement on mloss.org.