Projects authored by jens keilwagen.


Logo JMLR Jstacs 2.3

by keili - September 13, 2017, 14:25:38 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 62877 views, 13862 downloads, 0 subscriptions

About: A Java framework for statistical analysis and classification of biological sequences

Changes:

New classes and packages:

  • Jstacs 2.3 is the first release to be accompanied by JstacsFX, a library for building JavaFX-based graphical user interfaces based on JstacsTools
  • new interface MultiThreadedFunction
  • new class LargeSequenceReader for reading large sequence files in chunks
  • new interface QuickScanningSequenceScore
  • new class RegExpValidator for checking String inputs against a regular expression
  • new class IUPACDNAAlphabet

New features and improvements:

  • Alignments may now handle different costs for insert and delete gaps
  • ListResults may now be constructed from Collections of ResultSets
  • Several minor improvements and bugfixes in many classes
  • Improvements of documentation of several classes