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Logo svmPRAT 1.0

by rangwala - December 28, 2009, 00:27:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 6703 views, 1652 downloads, 1 subscription

About: BACKGROUND:Over the last decade several prediction methods have been developed for determining the structural and functional properties of individual protein residues using sequence and sequence-derived information. Most of these methods are based on support vector machines as they provide accurate and generalizable prediction models. RESULTS:We present a general purpose protein residue annotation toolkit (svmPRAT) to allow biologists to formulate residue-wise prediction problems. svmPRAT formulates the annotation problem as a classification or regression problem using support vector machines. One of the key features of svmPRAT is its ease of use in incorporating any user-provided information in the form of feature matrices. For every residue svmPRAT captures local information around the reside to create fixed length feature vectors. svmPRAT implements accurate and fast kernel functions, and also introduces a flexible window-based encoding scheme that accurately captures signals and pattern for training eective predictive models. CONCLUSIONS:In this work we evaluate svmPRAT on several classification and regression problems including disorder prediction, residue-wise contact order estimation, DNA-binding site prediction, and local structure alphabet prediction. svmPRAT has also been used for the development of state-of-the-art transmembrane helix prediction method called TOPTMH, and secondary structure prediction method called YASSPP. This toolkit developed provides practitioners an efficient and easy-to-use tool for a wide variety of annotation problems. Availability: http://www.cs.gmu.edu/~mlbio/svmprat/

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Initial Announcement on mloss.org.


Logo crfpp 0.53

by sonne - May 8, 2009, 08:46:44 CET [ Project Homepage BibTeX Download ] 6699 views, 3348 downloads, 1 subscription

About: CRF++ is a simple, customizable, and open source implementation of Conditional Random Fields (CRFs) for segmenting/labeling sequential data.

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Initial Announcement on mloss.org.


Logo minFunc 2012

by markSchmidt - December 18, 2013, 01:07:07 CET [ Project Homepage BibTeX Download ] 6684 views, 1175 downloads, 1 subscription

About: minFunc is a Matlab function for unconstrained optimization of differentiable real-valued multivariate functions using line-search methods. It uses an interface very similar to the Matlab Optimization Toolbox function fminunc, and can be called as a replacement for this function. On many problems, minFunc requires fewer function evaluations to converge than fminunc (or minimize.m). Further it can optimize problems with a much larger number of variables (fminunc is restricted to several thousand variables), and uses a line search that is robust to several common function pathologies.

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Initial Announcement on mloss.org.


Logo r-cran-bigRR 1.3-10

by r-cran-robot - August 23, 2014, 00:00:00 CET [ Project Homepage BibTeX Download ] 6675 views, 1590 downloads, 0 subscriptions

About: Generalized Ridge Regression (with special advantage for p >> n cases)

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Fetched by r-cran-robot on 2018-04-01 00:00:06.218810


Logo r-cran-grpreg 2.3-0

by r-cran-robot - February 10, 2013, 00:00:00 CET [ Project Homepage BibTeX Download ] 6646 views, 1482 downloads, 0 subscriptions

About: Regularization paths for regression models with grouped covariates

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Fetched by r-cran-robot on 2013-04-01 00:00:05.489694


Logo mldata.org svn-r1070-Apr-2011

by sonne - April 8, 2011, 10:15:49 CET [ Project Homepage BibTeX Download ] 6641 views, 1604 downloads, 1 subscription

About: The source code of the mldata.org site - a community portal for machine learning data sets.

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Initial Announcement on mloss.org.


Logo ROC algorithms 1.0

by tfawcett - January 9, 2010, 19:52:00 CET [ BibTeX BibTeX for corresponding Paper Download ] 6630 views, 1688 downloads, 1 subscription

About: A set of Perl programs for generating and manipulating ROC curves.

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Initial Announcement on mloss.org.


About: You can use the software in this package to efficiently sample from

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Initial Announcement on mloss.org.


Logo ChemCpp 1.0.2

by pmahe - November 28, 2007, 21:47:44 CET [ Project Homepage BibTeX Download ] 6599 views, 2279 downloads, 0 subscriptions

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About: ChemCpp is a C++ toolbox for chemoinformatics focusing on the computation of kernel functions between chemical compounds.

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Initial Announcement on mloss.org.


Logo Tekkotsu 4.0

by touretzky - December 5, 2007, 10:28:02 CET [ Project Homepage BibTeX Download ] 6582 views, 1525 downloads, 0 subscriptions

About: Tekkotsu is a high-level framework for robot programming that provides primitives for perception, manipulation, navigation, and control. It supports a variety of robot platforms.

Changes:

Initial Announcement on mloss.org.


Showing Items 371-380 of 672 on page 38 of 68: First Previous 33 34 35 36 37 38 39 40 41 42 43 Next Last