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Logo ROC algorithms 1.0

by tfawcett - January 9, 2010, 19:52:00 CET [ BibTeX BibTeX for corresponding Paper Download ] 4503 views, 908 downloads, 1 subscription

About: A set of Perl programs for generating and manipulating ROC curves.

Changes:

Initial Announcement on mloss.org.


Logo HDDM 0.5

by Wiecki - April 24, 2013, 02:53:07 CET [ Project Homepage BibTeX Download ] 4491 views, 1155 downloads, 1 subscription

About: HDDM is a python toolbox for hierarchical Bayesian parameter estimation of the Drift Diffusion Model (via PyMC). Drift Diffusion Models are used widely in psychology and cognitive neuroscience to study decision making.

Changes:
  • New and improved HDDM model with the following changes:
    • Priors: by default model will use informative priors (see http://ski.clps.brown.edu/hddm_docs/methods.html#hierarchical-drift-diffusion-models-used-in-hddm) If you want uninformative priors, set informative=False.
    • Sampling: This model uses slice sampling which leads to faster convergence while being slower to generate an individual sample. In our experiments, burnin of 20 is often good enough.
    • Inter-trial variablity parameters are only estimated at the group level, not for individual subjects.
    • The old model has been renamed to HDDMTransformed.
    • HDDMRegression and HDDMStimCoding are also using this model.
  • HDDMRegression takes patsy model specification strings. See http://ski.clps.brown.edu/hddm_docs/howto.html#estimate-a-regression-model and http://ski.clps.brown.edu/hddm_docs/tutorial_regression_stimcoding.html#chap-tutorial-hddm-regression
  • Improved online documentation at http://ski.clps.brown.edu/hddm_docs
  • A new HDDM demo at http://ski.clps.brown.edu/hddm_docs/demo.html
  • Ratcliff's quantile optimization method for single subjects and groups using the .optimize() method
  • Maximum likelihood optimization.
  • Many bugfixes and better test coverage.
  • hddm_fit.py command line utility is depracated.

Logo OLaRankExact 1.0

by antojne - June 24, 2009, 17:03:48 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4467 views, 1074 downloads, 1 subscription

About: OLaRank is an online solver of the dual formulation of support vector machines for sequence labeling using viterbi decoding.

Changes:

Initial Announcement on mloss.org.


Logo GraphDemo 1.0

by ule - November 27, 2007, 20:11:21 CET [ Project Homepage BibTeX Download ] 4460 views, 1260 downloads, 0 subscriptions

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About: The GraphDemo provides Matlab GUIs to explore similarity graphs and their use in machine learning. It aims to highlight the behavior of different kinds of similarity graphs and to demonstrate their [...]

Changes:

Initial Announcement on mloss.org.


Logo SnOB beta

by risi - October 5, 2008, 21:39:18 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4452 views, 974 downloads, 1 subscription

About: SnOB is a C++ library implementing fast Fourier transforms on the symmetric group (group of permutations). Such Fourier transforms are used by some ranking and identity management algorithms, as [...]

Changes:

Initial Announcement on mloss.org.


Logo Action Recognition by Dense Trajectories 1.0

by openpr_nlpr - June 6, 2012, 11:38:07 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4448 views, 824 downloads, 1 subscription

About: The code is for computing state-of-the-art video descriptors for action recognition. The most up-to-date information can be found at: http://lear.inrialpes.fr/people/wang/dense_trajectories

Changes:

Initial Announcement on mloss.org.


Logo Boosted Decision Trees and Lists 1.0.4

by melamed - July 25, 2014, 23:08:32 CET [ BibTeX Download ] 4431 views, 1347 downloads, 3 subscriptions

About: Boosting algorithms for classification and regression, with many variations. Features include: Scalable and robust; Easily customizable loss functions; One-shot training for an entire regularization path; Continuous checkpointing; much more

Changes:
  • added ElasticNets as a regularization option
  • fixed some segfaults, memory leaks, and out-of-range errors, which were creeping in in some corner cases
  • added a couple of I/O optimizations

Logo mldata.org svn-r1070-Apr-2011

by sonne - April 8, 2011, 10:15:49 CET [ Project Homepage BibTeX Download ] 4431 views, 943 downloads, 1 subscription

About: The source code of the mldata.org site - a community portal for machine learning data sets.

Changes:

Initial Announcement on mloss.org.


Logo BCILAB 1.0-beta

by chkothe - January 6, 2012, 23:47:55 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4412 views, 916 downloads, 1 subscription

About: MATLAB toolbox for advanced Brain-Computer Interface (BCI) research.

Changes:

Initial Announcement on mloss.org.


Logo svmPRAT 1.0

by rangwala - December 28, 2009, 00:27:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4394 views, 1133 downloads, 1 subscription

About: BACKGROUND:Over the last decade several prediction methods have been developed for determining the structural and functional properties of individual protein residues using sequence and sequence-derived information. Most of these methods are based on support vector machines as they provide accurate and generalizable prediction models. RESULTS:We present a general purpose protein residue annotation toolkit (svmPRAT) to allow biologists to formulate residue-wise prediction problems. svmPRAT formulates the annotation problem as a classification or regression problem using support vector machines. One of the key features of svmPRAT is its ease of use in incorporating any user-provided information in the form of feature matrices. For every residue svmPRAT captures local information around the reside to create fixed length feature vectors. svmPRAT implements accurate and fast kernel functions, and also introduces a flexible window-based encoding scheme that accurately captures signals and pattern for training eective predictive models. CONCLUSIONS:In this work we evaluate svmPRAT on several classification and regression problems including disorder prediction, residue-wise contact order estimation, DNA-binding site prediction, and local structure alphabet prediction. svmPRAT has also been used for the development of state-of-the-art transmembrane helix prediction method called TOPTMH, and secondary structure prediction method called YASSPP. This toolkit developed provides practitioners an efficient and easy-to-use tool for a wide variety of annotation problems. Availability: http://www.cs.gmu.edu/~mlbio/svmprat/

Changes:

Initial Announcement on mloss.org.


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