Projects that are tagged with supervised learning.


Logo JMLR Jstacs 2.2

by keili - February 17, 2016, 11:57:56 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22733 views, 5309 downloads, 3 subscriptions

About: A Java framework for statistical analysis and classification of biological sequences

Changes:

New classes and packages:

  • CorreationCoefficient: PerformanceMeasure
  • de.jstacs.clustering: package with classes for hierarchical clustering
  • DeBruijnGraphSequenceGenerator and DeBruijnSequenceGenerator for generating De Buijn sequences
  • CyclicSequenceAdaptor for representing cyclic sequences
  • PlotGeneratorResult for representing results that plot images to a Graphics2D object
  • TextResult for results that may be stored as text files
  • package de.jstacs.results.savers for generic classes that store results to disk
  • LimitedSparseLocalInhomogeneousMixtureDiffSM_higherOrder for sparse local inhomogeneous mixture (Slim) models
  • PFMWrapperTrainSM for representing position frequency matrices and position weight matrices from databases
  • package de.jstacs.tools with classes for generic Jstacs tools that may be used in different user interfaces (command line, Galaxy, JavaFX)
  • Compression for ZIP compression of Strings
  • package de.jstacs.utils.graphics with generic GraphicsAdaptor using Apache XML commons
  • projects: Dimont, GeMoMa, Slim, TALEN, motif comparison

New features and improvements:

  • Major restructuring of Alignment for better efficiency
  • Alignment Costs and StringAlignment now Storable
  • New constructor of DataSet allowing a specified percentage of sequences to mismatch the given alphabet
  • BioJavaAdapter ported to BioJava 1.9
  • XMLParser now also allows for storing Sequences
  • New method for parsing HMMer profile HMMs in HMMFactory
  • Several minor improvements and bugfixes in many classes
  • Improvements of documentation of several classes

Logo KeBABS 1.4.1

by UBod - November 3, 2015, 11:33:46 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 12856 views, 2350 downloads, 3 subscriptions

About: Kernel-Based Analysis of Biological Sequences

Changes:
  • new method to compute prediction profiles from models trained with mixture kernels
  • correction for position specific kernel with offsets
  • corrections for prediction profile of motif kernel
  • additional hint on help page of kbsvm

Logo SALSA.jl 0.0.5

by jumutc - September 28, 2015, 17:28:56 CET [ Project Homepage BibTeX Download ] 1350 views, 272 downloads, 1 subscription

About: SALSA (Software lab for Advanced machine Learning with Stochastic Algorithms) is an implementation of the well-known stochastic algorithms for Machine Learning developed in the high-level technical computing language Julia. The SALSA software package is designed to address challenges in sparse linear modelling, linear and non-linear Support Vector Machines applied to large data samples with user-centric and user-friendly emphasis.

Changes:

Initial Announcement on mloss.org.


Logo libAGF 0.9.8

by Petey - December 6, 2014, 02:35:39 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 14959 views, 2870 downloads, 2 subscriptions

About: C++ software for statistical classification, probability estimation and interpolation/non-linear regression using variable bandwidth kernel estimation.

Changes:

New in Version 0.9.8:

  • bug fixes: svm file conversion works properly and is more general

  • non-hierarchical multi-borders has 3 options for solving for the conditional probabilities: matrix inversion, voting, and matrix inversion over-ridden by voting, with re-normalization

  • multi-borders now works with external binary classifiers

  • random numbers resolve a tie when selecting classes based on probabilities

  • pair of routines, sort_discrete_vectors and search_discrete_vectors, for classification based on n-d binning (still experimental)

  • command options have been changed with many new additions, see QUICKSTART file or run the relevant commands for details


Logo RankSVM NC 1.0

by rflamary - July 10, 2014, 15:51:21 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 3469 views, 905 downloads, 1 subscription

About: This package is an implementation of a linear RankSVM solver with non-convex regularization.

Changes:

Initial Announcement on mloss.org.


Logo MyMediaLite 3.10

by zenog - October 8, 2013, 22:29:29 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 69495 views, 12639 downloads, 1 subscription

About: MyMediaLite is a lightweight, multi-purpose library of recommender system algorithms.

Changes:

Mostly bug fixes.

For details see: https://github.com/zenogantner/MyMediaLite/blob/master/doc/Changes


Logo BCILAB 1.0-beta

by chkothe - January 6, 2012, 23:47:55 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5570 views, 1193 downloads, 1 subscription

About: MATLAB toolbox for advanced Brain-Computer Interface (BCI) research.

Changes:

Initial Announcement on mloss.org.


Logo Kernel Machine Library 0.2

by pawelm - December 27, 2011, 17:14:01 CET [ Project Homepage BibTeX BibTeX for corresponding Paper ] 6073 views, 255 downloads, 1 subscription

About: The Kernel-Machine Library is a free (released under the LGPL) C++ library to promote the use of and progress of kernel machines.

Changes:

Updated mloss entry (minor fixes).


Logo Correlative Matrix Mapping, CMM 1.1

by emstrick - July 5, 2011, 15:15:21 CET [ BibTeX BibTeX for corresponding Paper Download ] 6418 views, 1476 downloads, 1 subscription

About: Correlative Matrix Mapping (CMM) provides a supervised linear data mapping into a Euclidean subspace of given dimension. Applications include denoising, visualization, label-specific data preprocessing, and assessment of data attribute pairs relevant for the supervised mapping. Solving auto-association problems yields linear multidimensional scaling, similar to PCA, but usually with more faithful low-dimensional mappings.

Changes:

Tue Jul 5 14:40:03 CEST 2011 - Bugfixes and cleanups

  • single precision data affected pinv(). Now fairer using double precision.
  • early stopping did not work properly; now fixed
  • Hessian update mode globally controlled via hessmode, 'lbfgs' / 'bfgs'
  • distmat.m corrected for rounding problems and extended to distmat(X,Y)
  • replaced files: corv.m + corvgrad.m -> corvg.m
  • removed unused files: corrmat.m, splitdata.m, traforankapply.m

Logo pHMM4weka 1.0

by smm52 - October 22, 2010, 03:48:07 CET [ Project Homepage BibTeX Download ] 4817 views, 1408 downloads, 1 subscription

About: This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs.

Changes:

description changed


Logo ELF Ensemble Learning Framework 0.1

by mjahrer - May 10, 2010, 23:54:53 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 6502 views, 1134 downloads, 1 subscription

About: ELF provides many well implemented supervised learners for classification and regression tasks with an opportunity of ensemble learning.

Changes:

Initial Announcement on mloss.org.


Logo rdetools 0.1

by mikio - December 4, 2008, 22:56:37 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5385 views, 1265 downloads, 1 subscription

About: This software contains several matlab scripts for computing the RDE (relevant dimensionality estimate). The RDE measures the number of leading PCA components in feature space which contain the [...]

Changes:

Initial Announcement on mloss.org.