Projects that are tagged with similarity measure.


Logo APCluster 1.4.2

by UBod - January 19, 2016, 13:56:01 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 28015 views, 4923 downloads, 3 subscriptions

Rating Whole StarWhole StarWhole StarWhole Star1/2 Star
(based on 2 votes)

About: The apcluster package implements Frey's and Dueck's Affinity Propagation clustering in R. The package further provides leveraged affinity propagation, exemplar-based agglomerative clustering, and various tools for visual analysis of clustering results.

Changes:
  • switched sequence kernel example in vignette from 'kernlab' to 'kebabs' package
  • workaround to ensure that all apcluster*() methods are able to process KernelMatrix objects (cf. kebabs package)
  • replaced data set ch22Promoters by plain text file (FASTA format) in inst/examples
  • bug fix in the heatmap() method
  • vignette engine changed from Sweave to knitr