Projects that are tagged with kernels.


Logo KeBABS 1.0.3

by UBod - January 28, 2015, 10:19:33 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1311 views, 208 downloads, 1 subscription

About: Kernel-Based Analysis Of Biological Sequences

Changes:
  • extension of function linearKernel to optionally return a sparse kernel matrix
  • new accessor SVindex for class KBModel
  • error correction in subsetting of sparse explicit representation for head / tail
  • error correction of vector length overflow in sparse explicit representation for very large number of sequences in spectrum, gappy pair and motif kernel
  • error correction for training with position specific kernel and computation of feature weights
  • error correction in coercion of kernel to character for distance weighting
  • error correction in subsetting of prediction profile
  • error correction in spectrum, gappy pair and motif kernel for kernel matrix - last feature was missing in kernel value in rare situations
  • error correction and minor C code changes for mismatch kernel
  • check uniqueness of motifs in motif kernel
  • build warnings on Windows removed
  • minor changes in help pages
  • change name of vignette Rnw to lowercase
  • minor changes in vignette

Logo JMLR JKernelMachines 2.5

by dpicard - December 11, 2014, 17:51:42 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 15027 views, 3620 downloads, 4 subscriptions

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About: machine learning library in java for easy development of new kernels

Changes:

Version 2.5

  • New active learning algorithms
  • Better threading management
  • New multiclass SVM algorithm based on SDCA
  • Handle class balancing in cross-validation
  • Optional support of EJML switch to version 0.26
  • Various bugfixes and improvements

Logo APCluster 1.4.1

by UBod - December 10, 2014, 12:58:29 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 19359 views, 3519 downloads, 3 subscriptions

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About: The apcluster package implements Frey's and Dueck's Affinity Propagation clustering in R. The package further provides leveraged affinity propagation, exemplar-based agglomerative clustering, and various tools for visual analysis of clustering results.

Changes:
  • fixes in C++ code of sparse affinity propagation

Logo Rchemcpp 1.99.0

by klambaue - September 10, 2013, 09:10:13 CET [ Project Homepage BibTeX Download ] 3257 views, 857 downloads, 1 subscription

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About: The Rchemcpp package implements the marginalized graph kernel and extensions, Tanimoto kernels, graph kernels, pharmacophore and 3D kernels suggested for measuring the similarity of molecules.

Changes:

Moved from CRAN to Bioconductor. Improved handling of molecules, visualization and examples.


Logo OpenKernel library 0.1

by allauzen - April 23, 2010, 05:25:20 CET [ Project Homepage BibTeX Download ] 9237 views, 1104 downloads, 1 subscription

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About: OpenKernel is a library for creating, combining, learning and using kernels for machine learning applications.

Changes:

Initial Announcement on mloss.org.


Logo Elefant 0.4

by kishorg - October 17, 2009, 08:48:19 CET [ Project Homepage BibTeX Download ] 17668 views, 7543 downloads, 2 subscriptions

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About: Elefant is an open source software platform for the Machine Learning community licensed under the Mozilla Public License (MPL) and developed using Python, C, and C++. We aim to make it the platform [...]

Changes:

This release contains the Stream module as a first step in the direction of providing C++ library support. Stream aims to be a software framework for the implementation of large scale online learning algorithms. Large scale, in this context, should be understood as something that does not fit in the memory of a standard desktop computer.

Added Bundle Methods for Regularized Risk Minimization (BMRM) allowing to choose from a list of loss functions and solvers (linear and quadratic).

Added the following loss classes: BinaryClassificationLoss, HingeLoss, SquaredHingeLoss, ExponentialLoss, LogisticLoss, NoveltyLoss, LeastMeanSquareLoss, LeastAbsoluteDeviationLoss, QuantileRegressionLoss, EpsilonInsensitiveLoss, HuberRobustLoss, PoissonRegressionLoss, MultiClassLoss, WinnerTakesAllMultiClassLoss, ScaledSoftMarginMultiClassLoss, SoftmaxMultiClassLoss, MultivariateRegressionLoss

Graphical User Interface provides now extensive documentation for each component explaining state variables and port descriptions.

Changed saving and loading of experiments to XML (thereby avoiding storage of large input data structures).

Unified automatic input checking via new static typing extending Python properties.

Full support for recursive composition of larger components containing arbitrary statically typed state variables.


Logo LASVM 1.1

by leonbottou - August 3, 2009, 15:50:30 CET [ Project Homepage BibTeX Download ] 8942 views, 1594 downloads, 0 subscriptions

About: Reference implementation of the LASVM online and active SVM algorithms as described in the JMLR paper. The interesting bit is a small C library that implements the LASVM process and reprocess [...]

Changes:

Minor bug fix


Logo Easysvm 0.3

by gxr - June 25, 2009, 18:33:04 CET [ Project Homepage BibTeX Download ] 8349 views, 1603 downloads, 1 subscription

About: The Easysvm package provides a set of tools based on the Shogun toolbox allowing to train and test SVMs in a simple way.

Changes:

Fixes for shogun 0.7.3.


Logo RapidMiner 4.0

by ingomierswa - November 16, 2007, 02:31:48 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 15973 views, 2899 downloads, 0 comments, 0 subscriptions

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About: RapidMiner (formerly YALE) is one of the most widely used open-source data mining suites and software solutions due to its leading-edge technologies and its functional range. Applications of [...]

Changes:

Initial Announcement on mloss.org.