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Logo libcluster 2.3

by dsteinberg - February 27, 2016, 00:36:01 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 6475 views, 1348 downloads, 3 subscriptions

About: An extensible C++ library of Hierarchical Bayesian clustering algorithms, such as Bayesian Gaussian mixture models, variational Dirichlet processes, Gaussian latent Dirichlet allocation and more.

Changes:

New maximum cluster argument for all algorithms. Also no more matlab interface since it seemed no one was using it, and I cannot support it any longer.


About: Collection of algorithms for Gaussian Processes. Regression, Classification, Multi task, Multi output, Hierarchical, Sparse

Changes:

Initial Announcement on mloss.org.


Logo JMLR Jstacs 2.2

by keili - February 17, 2016, 11:57:56 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 29218 views, 6704 downloads, 3 subscriptions

About: A Java framework for statistical analysis and classification of biological sequences

Changes:

New classes and packages:

  • CorreationCoefficient: PerformanceMeasure
  • de.jstacs.clustering: package with classes for hierarchical clustering
  • DeBruijnGraphSequenceGenerator and DeBruijnSequenceGenerator for generating De Buijn sequences
  • CyclicSequenceAdaptor for representing cyclic sequences
  • PlotGeneratorResult for representing results that plot images to a Graphics2D object
  • TextResult for results that may be stored as text files
  • package de.jstacs.results.savers for generic classes that store results to disk
  • LimitedSparseLocalInhomogeneousMixtureDiffSM_higherOrder for sparse local inhomogeneous mixture (Slim) models
  • PFMWrapperTrainSM for representing position frequency matrices and position weight matrices from databases
  • package de.jstacs.tools with classes for generic Jstacs tools that may be used in different user interfaces (command line, Galaxy, JavaFX)
  • Compression for ZIP compression of Strings
  • package de.jstacs.utils.graphics with generic GraphicsAdaptor using Apache XML commons
  • projects: Dimont, GeMoMa, Slim, TALEN, motif comparison

New features and improvements:

  • Major restructuring of Alignment for better efficiency
  • Alignment Costs and StringAlignment now Storable
  • New constructor of DataSet allowing a specified percentage of sequences to mismatch the given alphabet
  • BioJavaAdapter ported to BioJava 1.9
  • XMLParser now also allows for storing Sequences
  • New method for parsing HMMer profile HMMs in HMMFactory
  • Several minor improvements and bugfixes in many classes
  • Improvements of documentation of several classes

Logo Libra 1.1.2d

by lowd - February 4, 2016, 08:51:50 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 26969 views, 5616 downloads, 3 subscriptions

About: The Libra Toolkit is a collection of algorithms for learning and inference with discrete probabilistic models, including Bayesian networks, Markov networks, dependency networks, sum-product networks, arithmetic circuits, and mixtures of trees.

Changes:

Version 1.1.2d (12/29/2015):

  • Minor fixes to scripts
  • Published in JMLR ML-OSS!

Logo pattern recognition tool 1.0

by openpr_nlpr - January 19, 2016, 03:54:11 CET [ Project Homepage BibTeX Download ] 2075 views, 505 downloads, 3 subscriptions

About: a tool for marking samples in images for database building, also including algorithm of LBP,HOG,and classifiers of SVM (six kernels), adaboost,BP and convolutional networks, extreme learning machine.

Changes:

Initial Announcement on mloss.org.


Logo DiffSharp 0.7.7

by gbaydin - January 4, 2016, 00:57:35 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 15625 views, 2970 downloads, 3 subscriptions

About: DiffSharp is a functional automatic differentiation (AD) library providing gradients, Hessians, Jacobians, directional derivatives, and matrix-free Hessian- and Jacobian-vector products as higher-order functions. It allows exact and efficient calculation of derivatives, with support for nesting.

Changes:

Fixed: Bug fix in forward AD implementation of Sigmoid and ReLU for D, DV, and DM (fixes #16, thank you @mrakgr)

Improvement: Performance improvement by removing several more Parallel.For and Array.Parallel.map operations, working better with OpenBLAS multithreading

Added: Operations involving incompatible dimensions of DV and DM will now throw exceptions for warning the user


Logo r-cran-bnclassify 0.3.2

by r-cran-robot - May 1, 2016, 00:00:04 CET [ Project Homepage BibTeX Download ] 2980 views, 743 downloads, 2 subscriptions

About: Learning Discrete Bayesian Network Classifiers from Data

Changes:

Fetched by r-cran-robot on 2016-05-01 00:00:04.546512


Logo Sparse PCA 2.0

by tbuehler - December 31, 2015, 16:24:42 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 8217 views, 1766 downloads, 3 subscriptions

About: A Matlab implementation of Sparse PCA using the inverse power method for nonlinear eigenproblems.

Changes:
  • Added deflation scheme to compute multiple principal components
  • Several internal runtime and memory optimizations
  • API change: sparsePCA.m is now used to compute multiple components; use computeTradeOffCurve.m to reproduce the examples in the NIPS paper

Logo Lua MapReduce v0.4.0

by pakozm - December 23, 2015, 09:32:11 CET [ Project Homepage BibTeX Download ] 9831 views, 2127 downloads, 3 subscriptions

About: Lua-MapReduce framework implemented in Lua using luamongo driver and MongoDB as storage. It follows Iterative MapReduce for training of Machine Learning statistical models.

Changes:
  • Updated to work with luamongo v0.5.0, which uses C++ driver legacy-1.1.0

Logo BayesOpt, a Bayesian Optimization toolbox 0.8.2

by rmcantin - December 9, 2015, 04:53:31 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 32640 views, 5931 downloads, 4 subscriptions

About: BayesOpt is an efficient, C++ implementation of the Bayesian optimization methodology for nonlinear-optimization, experimental design and stochastic bandits. In the literature it is also called Sequential Kriging Optimization (SKO) or Efficient Global Optimization (EGO). There are also interfaces for C, Matlab/Octave and Python.

Changes:

-Fixed bug in save/restore. -Fixed bug in initial design.


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