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Logo NetPro 1.1.17

by lml - January 25, 2011, 19:02:53 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5498 views, 1332 downloads, 1 subscription

About: Tools for functional network analysis.

Changes:

Initial Announcement on mloss.org.


Logo sccan 0.0

by stnava - January 13, 2011, 18:14:20 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5174 views, 1302 downloads, 1 subscription

About: A work in progress

Changes:

Initial Announcement on mloss.org.


Logo KReator 1.2.3198

by mthimm - December 23, 2010, 12:07:25 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 12412 views, 2676 downloads, 1 subscription

About: KReator is an integrated development environment (IDE) for relational probabilistic knowledge representation languages. At the moment, KReator supports Bayesian Logic Programs (BLPs), Markov Logic Networks (MLNs), Relational Maximum Entropy (RME), Relational Bayesian Networks (RBN), and Probabilistic Prolog (ProbLog).

Changes:
  • several bugfixes
  • Beta version of ProbLog plugin
  • enhanced command completion in console
  • enhanced error messages for syntax errors
  • refactored logic libraries
  • added prettyprint function in console
  • added syntax highlighting for RBNs

Logo scikits.learn 0.6

by fabianp - December 22, 2010, 11:58:30 CET [ Project Homepage BibTeX Download ] 9544 views, 1751 downloads, 1 subscription

Rating Whole StarWhole StarWhole StarWhole Star1/2 Star
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About: Obsolete. Use https://mloss.org/software/view/240/ instead.

Changes:

0.6 release


Logo Epistatic MAP Imputation 1.1

by colm - November 25, 2010, 21:01:10 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4511 views, 1036 downloads, 1 subscription

About: Epistatic miniarray profiles (E-MAPs) are a high-throughput approach capable of quantifying aggravating or alleviating genetic interactions between gene pairs. The datasets resulting from E-MAP experiments typically take the form of a symmetric pairwise matrix of interaction scores. These datasets have a significant number of missing values - up to 35% - that can reduce the effectiveness of some data analysis techniques and prevent the use of others. This project contains nearest neighbor based tools for the imputation and prediction of these missing values. The code is implemented in Python and uses a nearest neighbor based approach. Two variants are used - a simple weighted nearest neighbors, and a local least squares based regression.

Changes:

Initial Announcement on mloss.org.


About: OpenGM is a free C++ template library, a command line tool and a set of MATLAB functions for optimization in higher order graphical models. Graphical models of any order and structure can be built either in C++ or in MATLAB, using simple and intuitive commands. These models can be stored in HDF5 files and subjected to state-of-the-art optimization algorithms via the OpenGM command line optimizer. All library functions can also be called directly from C++ code. OpenGM realizes the Inference Algorithm Interface (IAI), a concept that makes it easy for programmers to use their own algorithms and factor classes with OpenGM.

Changes:

Initial Announcement on mloss.org.


Logo Pyriel 1.5

by tfawcett - October 27, 2010, 09:12:53 CET [ BibTeX BibTeX for corresponding Paper Download ] 16649 views, 3900 downloads, 1 subscription

About: Pyriel is a Python system for learning classification rules from data. Unlike other rule learning systems, it is designed to learn rule lists that maximize the area under the ROC curve (AUC) instead of accuracy. Pyriel is mostly an experimental research tool, but it's robust and fast enough to be used for lightweight industrial data mining.

Changes:

1.5 Changed CF (confidence factor) to do LaPlace smoothing of estimates. New flag "--score-for-class C" causes scores to be computed relative to a given (positive) class. For two-class problems. Fixed bug in example sampling code (--sample n) Fixed bug keeping old-style example formats (terminated by dot) from working. More code restructuring.


Logo pHMM4weka 1.0

by smm52 - October 22, 2010, 03:48:07 CET [ Project Homepage BibTeX Download ] 5095 views, 1472 downloads, 1 subscription

About: This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs.

Changes:

description changed


Logo SketchSort 0.0.6

by ytabei - October 11, 2010, 18:33:21 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5055 views, 924 downloads, 1 subscription

About: A Sortware for All Pairs Similarity Search

Changes:

Initial Announcement on mloss.org.


Logo KeplerWeka 20101008

by fracpete - October 9, 2010, 05:27:13 CET [ Project Homepage BibTeX Download ] 12653 views, 3952 downloads, 1 subscription

About: KeplerWeka represents the integration of all the functionality of the WEKA Machine Learning Workbench into the open-source scientific workflow Kepler. Among them are classification, [...]

Changes:
  • Now compatible with Kepler 2.0
  • New version of WEKA included (patched 3.7.2 release), WEKA's new package manager works in conjunction with Kepler
  • Renamed actor Count to ConditionalTee, introduced new Count actor
  • Removed actors OutputLogger, MultiSync, TwinSync

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