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Logo FABIA 2.8.0

by hochreit - October 18, 2013, 10:14:57 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 11450 views, 2397 downloads, 1 subscription

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About: FABIA is a biclustering algorithm that clusters rows and columns of a matrix simultaneously. Consequently, members of a row cluster are similar to each other on a subset of columns and, analogously, members of a column cluster are similar to each other on a subset of rows. Biclusters are found by factor analysis where both the factors and the loading matrix are sparse. FABIA is a multiplicative model that extracts linear dependencies between samples and feature patterns. Applications include detection of transcriptional modules in gene expression data and identification of haplotypes/>identity by descent< consisting of rare variants obtained by next generation sequencing.

Changes:

CHANGES IN VERSION 2.8.0

NEW FEATURES

o rescaling of lapla
o extractPlot does not plot sorted matrices

CHANGES IN VERSION 2.4.0

o spfabia bugfixes

CHANGES IN VERSION 2.3.1

NEW FEATURES

o Getters and setters for class Factorization

2.0.0:

  • spfabia: fabia for a sparse data matrix (in sparse matrix format) and sparse vector/matrix computations in the code to speed up computations. spfabia applications: (a) detecting >identity by descent< in next generation sequencing data with rare variants, (b) detecting >shared haplotypes< in disease studies based on next generation sequencing data with rare variants;
  • fabia for non-negative factorization (parameter: non_negative);
  • changed to C and removed dependencies to Rcpp;
  • improved update for lambda (alpha should be smaller, e.g. 0.03);
  • introduced maximal number of row elements (lL);
  • introduced cycle bL when upper bounds nL or lL are effective;
  • reduced computational complexity;
  • bug fixes: (a) update formula for lambda: tighter approximation, (b) corrected inverse of the conditional covariance matrix of z;

1.4.0:

  • New option nL: maximal number of biclusters per row element;
  • Sort biclusters according to information content;
  • Improved and extended preprocessing;
  • Update to R2.13

Logo ISSE 0.2.0

by njb - October 15, 2013, 03:03:56 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 3613 views, 690 downloads, 1 subscription

About: An audio editing tool for single-channel source separation.

Changes:

Stereo processing, bug fixes, UI updates.


Logo JMLR CAM Java 3.1

by wangny - October 14, 2013, 22:46:03 CET [ Project Homepage BibTeX Download ] 8243 views, 3484 downloads, 1 subscription

About: The CAM R-Java software provides a noval way to solve blind source separation problem.

Changes:

In this version, we fix the problem of not working under newest R version R-3.0.


Logo MLlib 0.8

by atalwalkar - October 10, 2013, 00:56:25 CET [ Project Homepage BibTeX Download ] 2626 views, 518 downloads, 1 subscription

About: MLlib provides a distributed machine learning (ML) library to address the growing need for scalable ML. MLlib is developed in Spark (http://spark.incubator.apache.org/), a cluster computing system designed for iterative computation. Moreover, it is a component of a larger system called MLbase (www.mlbase.org) that aims to provide user-friendly distributed ML functionality both for ML researchers and domain experts. MLlib currently consists of scalable implementations of algorithms for classification, regression, collaborative filtering and clustering.

Changes:

Initial Announcement on mloss.org.


Logo epac 0.10

by jinpengli - October 9, 2013, 14:00:15 CET [ Project Homepage BibTeX Download ] 2107 views, 563 downloads, 1 subscription

About: Embarrassingly Parallel Array Computing: EPAC is a machine learning workflow builder.

Changes:

Initial Announcement on mloss.org.


Logo MyMediaLite 3.10

by zenog - October 8, 2013, 22:29:29 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 54139 views, 10059 downloads, 1 subscription

About: MyMediaLite is a lightweight, multi-purpose library of recommender system algorithms.

Changes:

Mostly bug fixes.

For details see: https://github.com/zenogantner/MyMediaLite/blob/master/doc/Changes


Logo ClowdFlows 0.9

by janezkranjc - October 8, 2013, 02:57:49 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 2631 views, 526 downloads, 1 subscription

About: ClowdFlows is a web based platform for service oriented data mining publicly available at http://clowdflows.org . A web based interface allows users to construct data mining workflows that are hosted on the web and can be (if allowed by the author) accessed by anyone by following a URL of the workflow.

Changes:

Initial Announcement on mloss.org.


Logo factorie 1.0.0-M7

by apassos - October 7, 2013, 23:10:37 CET [ Project Homepage BibTeX Download ] 2293 views, 498 downloads, 1 subscription

About: [FACTORIE](http://factorie.cs.umass.edu) is a toolkit for deployable probabilistic modeling, implemented as a software library in [Scala](http://scala-lang.org). It provides its users with a succinct language for creating [factor graphs](http://en.wikipedia.org/wiki/Factor_graph), estimating parameters and performing inference. It also has implementations of many machine learning tools and a full NLP pipeline.

Changes:

Initial Announcement on mloss.org.


Logo JMLR scikitlearn 0.14.1

by fabianp - October 4, 2013, 15:01:45 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 16666 views, 6142 downloads, 3 subscriptions

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About: The scikit-learn project is a machine learning library in Python.

Changes:

Update for 0.14.1


Logo JMLR EnsembleSVM 2.0

by claesenm - March 31, 2014, 08:06:20 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 8550 views, 3055 downloads, 2 subscriptions

About: The EnsembleSVM library offers functionality to perform ensemble learning using Support Vector Machine (SVM) base models. In particular, we offer routines for binary ensemble models using SVM base classifiers. Experimental results have shown the predictive performance to be comparable with standard SVM models but with drastically reduced training time. Ensemble learning with SVM models is particularly useful for semi-supervised tasks.

Changes:

The library has been updated and features a variety of new functionality as well as more efficient implementations of original features. The following key improvements have been made:

  1. Support for multithreading in training and prediction with ensemble models. Since both of these are embarassingly parallel, this has induced a significant speedup (3-fold on quad-core).
  2. Extensive programming framework for aggregation of base model predictions which allows highly efficient prototyping of new aggregation approaches. Additionally we provide several predefined strategies, including (weighted) majority voting, logistic regression and nonlinear SVMs of your choice -- be sure to check out the esvm-edit tool! The provided framework also allows you to efficiently program your own, novel aggregation schemes.
  3. Full code transition to C++11, the latest C++ standard, which enabled various performance improvements. The new release requires moderately recent compilers, such as gcc 4.7.2+ or clang 3.2+.
  4. Generic implementations of convenient facilities have been added, such as thread pools, deserialization factories and more.

The API and ABI have undergone significant changes, many of which are due to the transition to C++11.


Showing Items 181-190 of 595 on page 19 of 60: First Previous 14 15 16 17 18 19 20 21 22 23 24 Next Last