20 projects found that use c as the programming language.
Showing Items 61-80 of 95 on page 4 of 5: Previous 1 2 3 4 5 Next

Logo svmPRAT 1.0

by rangwala - December 28, 2009, 00:27:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 3853 views, 958 downloads, 1 subscription

About: BACKGROUND:Over the last decade several prediction methods have been developed for determining the structural and functional properties of individual protein residues using sequence and sequence-derived information. Most of these methods are based on support vector machines as they provide accurate and generalizable prediction models. RESULTS:We present a general purpose protein residue annotation toolkit (svmPRAT) to allow biologists to formulate residue-wise prediction problems. svmPRAT formulates the annotation problem as a classification or regression problem using support vector machines. One of the key features of svmPRAT is its ease of use in incorporating any user-provided information in the form of feature matrices. For every residue svmPRAT captures local information around the reside to create fixed length feature vectors. svmPRAT implements accurate and fast kernel functions, and also introduces a flexible window-based encoding scheme that accurately captures signals and pattern for training eective predictive models. CONCLUSIONS:In this work we evaluate svmPRAT on several classification and regression problems including disorder prediction, residue-wise contact order estimation, DNA-binding site prediction, and local structure alphabet prediction. svmPRAT has also been used for the development of state-of-the-art transmembrane helix prediction method called TOPTMH, and secondary structure prediction method called YASSPP. This toolkit developed provides practitioners an efficient and easy-to-use tool for a wide variety of annotation problems. Availability: http://www.cs.gmu.edu/~mlbio/svmprat/

Changes:

Initial Announcement on mloss.org.


Logo Elefant 0.4

by kishorg - October 17, 2009, 08:48:19 CET [ Project Homepage BibTeX Download ] 17410 views, 7474 downloads, 2 subscriptions

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About: Elefant is an open source software platform for the Machine Learning community licensed under the Mozilla Public License (MPL) and developed using Python, C, and C++. We aim to make it the platform [...]

Changes:

This release contains the Stream module as a first step in the direction of providing C++ library support. Stream aims to be a software framework for the implementation of large scale online learning algorithms. Large scale, in this context, should be understood as something that does not fit in the memory of a standard desktop computer.

Added Bundle Methods for Regularized Risk Minimization (BMRM) allowing to choose from a list of loss functions and solvers (linear and quadratic).

Added the following loss classes: BinaryClassificationLoss, HingeLoss, SquaredHingeLoss, ExponentialLoss, LogisticLoss, NoveltyLoss, LeastMeanSquareLoss, LeastAbsoluteDeviationLoss, QuantileRegressionLoss, EpsilonInsensitiveLoss, HuberRobustLoss, PoissonRegressionLoss, MultiClassLoss, WinnerTakesAllMultiClassLoss, ScaledSoftMarginMultiClassLoss, SoftmaxMultiClassLoss, MultivariateRegressionLoss

Graphical User Interface provides now extensive documentation for each component explaining state variables and port descriptions.

Changed saving and loading of experiments to XML (thereby avoiding storage of large input data structures).

Unified automatic input checking via new static typing extending Python properties.

Full support for recursive composition of larger components containing arbitrary statically typed state variables.


Logo JMLR RL Glue and Codecs -- Glue 3.x and Codecs

by btanner - October 12, 2009, 07:50:03 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 16436 views, 1852 downloads, 1 subscription

About: RL-Glue allows agents, environments, and experiments written in Java, C/C++, Matlab, Python, and Lisp to inter operate, accelerating research by promoting software re-use in the community.

Changes:

RL-Glue paper has been published in JMLR.


Logo LASVM 1.1

by leonbottou - August 3, 2009, 15:50:30 CET [ Project Homepage BibTeX Download ] 8839 views, 1560 downloads, 0 subscriptions

About: Reference implementation of the LASVM online and active SVM algorithms as described in the JMLR paper. The interesting bit is a small C library that implements the LASVM process and reprocess [...]

Changes:

Minor bug fix


Logo DeltaLDA 0.1.1

by davidandrzej - July 16, 2009, 21:52:18 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 7250 views, 1255 downloads, 1 subscription

About: This software implements the DeltaLDA model, which is a modification of the Latent Dirichlet Allocation (LDA) model. DeltaLDA can use multiple topic mixing weight priors to jointly model multiple [...]

Changes:

-fixed some npy_intp[] memory leaks -fixed phi normalization bug


Logo COIN OR 1.2

by sonne - July 13, 2009, 10:51:10 CET [ Project Homepage BibTeX Download ] 3118 views, 942 downloads, 1 subscription

About: The Computational Infrastructure for Operations Research (COIN-OR) project is an initiative to spur the development of open-source software for the operations research community.

Changes:

Initial Announcement on mloss.org.


Logo SeDuMi 1.21

by sonne - July 13, 2009, 10:22:00 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 5570 views, 1142 downloads, 1 subscription

About: SeDuMi is a software package to solve optimization problems over symmetric cones. This includes linear, quadratic, second order conic and semidefinite optimization, and any combination of these.

Changes:

Initial Announcement on mloss.org.


Logo Aciqra 1.2.1

by Caglow - June 25, 2009, 23:30:22 CET [ BibTeX Download ] 2768 views, 1348 downloads, 1 subscription

About: A desktop planetarium and sky map program which shows the sky from anywhere on Earth at any time.

Changes:

Removed erroneous topocentric code. Increased maximum zoom for detail on planets.


Logo C MixSim 0.5

by volmeln - June 10, 2009, 19:37:42 CET [ Project Homepage BibTeX Download ] 4994 views, 1181 downloads, 1 subscription

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About: C-MixSim is an open source package written in C for simulating finite mixture models with Gaussian components. With a vast number of clustering algorithms, evaluating performance is important. C-MixSim provides an easy and convenient way of generating datasets from Gaussian mixture models with different levels of clustering complexity. C-MixSim is released under the GNU GPL license.

Changes:

Initial Announcement on mloss.org.


Logo CRFsuite 0.8

by chokkan - March 18, 2009, 15:19:02 CET [ Project Homepage BibTeX Download ] 5193 views, 1234 downloads, 1 subscription

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About: CRFSuite is a speed-oriented implementation of Conditional Random Fields (CRFs). This software features: parameter estimation using SGD and L-BFGS, l1/l2 regularization, simple data I/O format, etc.

Changes:

Initial Announcement on mloss.org.


Logo dataformat 0.1.1

by mikio - March 12, 2009, 16:07:55 CET [ Project Homepage BibTeX Download ] 7167 views, 1332 downloads, 2 subscriptions

About: The goal of this project is to provide code for reading and writing machine learning data sets for as many programming languages as possible.

Changes:

Forgot to include the Java sources.


Logo JMLR pebl Python Environment for Bayesian Learning 1.0.1

by abhik - March 5, 2009, 00:05:28 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 22735 views, 2209 downloads, 1 subscription

About: Pebl is a python library and command line application for learning the structure of a Bayesian network given prior knowledge and observations.

Changes:

Updated version to 1.0.1


Logo chi2 kernel 1.5

by gruel - February 15, 2009, 22:32:21 CET [ BibTeX Download ] 9180 views, 2023 downloads, 1 subscription

About: Very fast implementation of the chi-squared distance between histograms (or vectors with non-negative entries).

Changes:

Removed bug in symmetric chi-square distance and updated python wrapper to python 2.5 compatiblity.


Logo SVQP 2

by leonbottou - January 31, 2009, 14:22:04 CET [ Project Homepage BibTeX Download ] 5249 views, 1765 downloads, 0 subscriptions

About: SVQP1 and SVQP2 are QP solvers for training SVM.

Changes:

Initial Announcement on mloss.org.


Logo figtree 0.9.2

by vmorariu - January 17, 2009, 00:13:32 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 4306 views, 3573 downloads, 1 subscription

About: A library for fast computation of Gauss transforms in multiple dimensions, using the Improved Fast Gauss Transform and a tree data structure. This library is useful for efficient Kernel Density [...]

Changes:

Initial Announcement on mloss.org.


Logo MPIKmeans 1.5

by pgehler - January 16, 2009, 15:48:47 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 33254 views, 5176 downloads, 1 subscription

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About: A K-means clustering implementation for command-line, Python, Matlab and C. This algorithm yields the very same solution as standard Kmeans, even after each iteration. However it uses some triangle [...]

Changes:

Initial Announcement on mloss.org.


Logo hcluster 0.2.0

by damianeads - December 14, 2008, 14:03:49 CET [ Project Homepage BibTeX Download ] 3132 views, 797 downloads, 1 subscription

About: This library provides Python functions for agglomerative clustering. Its features include

Changes:

Initial Announcement on mloss.org.


Logo Disco 0.1

by tuulos - October 6, 2008, 11:14:48 CET [ Project Homepage BibTeX Download ] 6495 views, 1270 downloads, 1 subscription

About: Disco is an open-source implementation of the [Map-Reduce framework](http://en.wikipedia.org/wiki/MapReduce) for distributed computing. As the original framework, Disco supports parallel [...]

Changes:

Initial Announcement on mloss.org.


Logo Torch 5 5.1

by andresy - October 1, 2008, 04:25:12 CET [ Project Homepage BibTeX Download ] 10967 views, 1574 downloads, 2 subscriptions

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About: Torch5 provides a matlab-like environment for state-of-the-art machine learning algorithms. It is easy to use and provides a very efficient implementation, thanks to a easy and fast scripting [...]

Changes:

Initial Announcement on mloss.org.


About: GMRFLib is a library in C for fast and exact simulation of Gaussian Markov Random Fields (GMRF) on graphs.unconditional simulation of a GMRF, conditional simulation from a GMRF

Changes:

Initial Announcement on mloss.org.


Showing Items 61-80 of 95 on page 4 of 5: Previous 1 2 3 4 5 Next