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About: The Rchemcpp package implements the marginalized graph kernel and extensions, Tanimoto kernels, graph kernels, pharmacophore and 3D kernels suggested for measuring the similarity of molecules. Changes:Moved from CRAN to Bioconductor. Improved handling of molecules, visualization and examples.

About: An annotated java framework for machine learning, aimed at making it really easy to access analytically functions. Changes:Now supports OLS and GLS regression and NaiveBayes classification

About: 3layer neural network for regression with sigmoid activation function and command line interface similar to LibSVM. Changes:Initial Announcement on mloss.org.

About: Very simple code for training SVMs in the primal. Works particularly well on sparse linear problems. In the nonlinear case the entire kernel matrix needs to be computed, so for large problems it is [...] Changes:Initial Announcement on mloss.org.

About: The GraphDemo provides Matlab GUIs to explore similarity graphs and their use in machine learning. It aims to highlight the behavior of different kinds of similarity graphs and to demonstrate their [...] Changes:Initial Announcement on mloss.org.

About: A Matlab implementation of Sparse PCA using the inverse power method for nonlinear eigenproblems. Changes:

About: Itemset boosting (iBoost) performs linear regression in the complete space of power sets of mutations. It implements a forward feature selection procedure where, in each iteration, one mutation [...] Changes:Initial Announcement on mloss.org.

About: The Hidden Topic Markov Model Changes:Initial Announcement on mloss.org.

About: This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs. Changes:description changed
