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Logo FABIA 2.8.0

by hochreit - October 18, 2013, 10:14:57 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 9637 views, 2012 downloads, 1 subscription

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About: FABIA is a biclustering algorithm that clusters rows and columns of a matrix simultaneously. Consequently, members of a row cluster are similar to each other on a subset of columns and, analogously, members of a column cluster are similar to each other on a subset of rows. Biclusters are found by factor analysis where both the factors and the loading matrix are sparse. FABIA is a multiplicative model that extracts linear dependencies between samples and feature patterns. Applications include detection of transcriptional modules in gene expression data and identification of haplotypes/>identity by descent< consisting of rare variants obtained by next generation sequencing.

Changes:

CHANGES IN VERSION 2.8.0

NEW FEATURES

o rescaling of lapla
o extractPlot does not plot sorted matrices

CHANGES IN VERSION 2.4.0

o spfabia bugfixes

CHANGES IN VERSION 2.3.1

NEW FEATURES

o Getters and setters for class Factorization

2.0.0:

  • spfabia: fabia for a sparse data matrix (in sparse matrix format) and sparse vector/matrix computations in the code to speed up computations. spfabia applications: (a) detecting >identity by descent< in next generation sequencing data with rare variants, (b) detecting >shared haplotypes< in disease studies based on next generation sequencing data with rare variants;
  • fabia for non-negative factorization (parameter: non_negative);
  • changed to C and removed dependencies to Rcpp;
  • improved update for lambda (alpha should be smaller, e.g. 0.03);
  • introduced maximal number of row elements (lL);
  • introduced cycle bL when upper bounds nL or lL are effective;
  • reduced computational complexity;
  • bug fixes: (a) update formula for lambda: tighter approximation, (b) corrected inverse of the conditional covariance matrix of z;

1.4.0:

  • New option nL: maximal number of biclusters per row element;
  • Sort biclusters according to information content;
  • Improved and extended preprocessing;
  • Update to R2.13

Logo ISSE 0.2.0

by njb - October 15, 2013, 03:03:56 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 2484 views, 492 downloads, 1 subscription

About: An audio editing tool for single-channel source separation.

Changes:

Stereo processing, bug fixes, UI updates.


Logo JMLR CAM Java 3.1

by wangny - October 14, 2013, 22:46:03 CET [ Project Homepage BibTeX Download ] 6162 views, 2796 downloads, 1 subscription

About: The CAM R-Java software provides a noval way to solve blind source separation problem.

Changes:

In this version, we fix the problem of not working under newest R version R-3.0.


Logo MLlib 0.8

by atalwalkar - October 10, 2013, 00:56:25 CET [ Project Homepage BibTeX Download ] 1816 views, 365 downloads, 1 subscription

About: MLlib provides a distributed machine learning (ML) library to address the growing need for scalable ML. MLlib is developed in Spark (http://spark.incubator.apache.org/), a cluster computing system designed for iterative computation. Moreover, it is a component of a larger system called MLbase (www.mlbase.org) that aims to provide user-friendly distributed ML functionality both for ML researchers and domain experts. MLlib currently consists of scalable implementations of algorithms for classification, regression, collaborative filtering and clustering.

Changes:

Initial Announcement on mloss.org.


Logo epac 0.10

by jinpengli - October 9, 2013, 14:00:15 CET [ Project Homepage BibTeX Download ] 1498 views, 395 downloads, 1 subscription

About: Embarrassingly Parallel Array Computing: EPAC is a machine learning workflow builder.

Changes:

Initial Announcement on mloss.org.


Logo MyMediaLite 3.10

by zenog - October 8, 2013, 22:29:29 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 45254 views, 8538 downloads, 1 subscription

About: MyMediaLite is a lightweight, multi-purpose library of recommender system algorithms.

Changes:

Mostly bug fixes.

For details see: https://github.com/zenogantner/MyMediaLite/blob/master/doc/Changes


Logo ClowdFlows 0.9

by janezkranjc - October 8, 2013, 02:57:49 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 1791 views, 344 downloads, 1 subscription

About: ClowdFlows is a web based platform for service oriented data mining publicly available at http://clowdflows.org . A web based interface allows users to construct data mining workflows that are hosted on the web and can be (if allowed by the author) accessed by anyone by following a URL of the workflow.

Changes:

Initial Announcement on mloss.org.


Logo factorie 1.0.0-M7

by apassos - October 7, 2013, 23:10:37 CET [ Project Homepage BibTeX Download ] 1552 views, 307 downloads, 1 subscription

About: [FACTORIE](http://factorie.cs.umass.edu) is a toolkit for deployable probabilistic modeling, implemented as a software library in [Scala](http://scala-lang.org). It provides its users with a succinct language for creating [factor graphs](http://en.wikipedia.org/wiki/Factor_graph), estimating parameters and performing inference. It also has implementations of many machine learning tools and a full NLP pipeline.

Changes:

Initial Announcement on mloss.org.


Logo JMLR scikitlearn 0.14.1

by fabianp - October 4, 2013, 15:01:45 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 13572 views, 4829 downloads, 3 subscriptions

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About: The scikit-learn project is a machine learning library in Python.

Changes:

Update for 0.14.1


Logo PILCO policy search framework 0.9

by marc - September 27, 2013, 12:45:12 CET [ Project Homepage BibTeX BibTeX for corresponding Paper Download ] 2198 views, 410 downloads, 1 subscription

About: Data-efficient policy search framework using probabilistic Gaussian process models

Changes:

Initial Announcement on mloss.org.


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